1. Rename "code" directory to "R". See examples [1](https://github.com/tidyverse), [2](https://github.com/Tatvic/RGoogleAnalytics). 2. Consider having "data", "data/input" and "data/output". Currently you have "data" and "out_data" which is not ideal. 3. File `setpath.R` seems extra (with only two lines). Remove it. 4. Rename `run_one_setting.sh` to `run.sh` and move it to base directory. 5. The `generate_setting` directory only contains a single file. Move the file to be with the rest of the code. 6. Remove the file named `code/workhorse/.nfs0000000007b8271b00000630` 7. The `workhorse` directory is adding an extra, unnecessary level. Move all to `./R` directory under the base.
