TrajGWAS on SnpData

[espenmei]

Hi,

I have been experimenting with TrajGWAS recently. Great package!
Often I use SnpArrays to manipulate genotype data. I seems to me that it would be very convenient to reference the SnpData object directly when making a call to trajgwas, rather than pointing to a set of for example plink files. Then I wouldn't need to keep track of names of files that SnpData creates.

Is this possible? Or should I rather point to the files that SnpArrays create when filtering etc.? Maybe there is something i'm not seeing.

All the best,
Espen

[kose-y]

Thanks for your suggestion. We will add that feature soon, and if you can, you can contribute the feature by creating a pull request.