From 7fac101e7345a80732c78e544ebc89806be96cbb Mon Sep 17 00:00:00 2001 From: Li Xing Date: Sat, 14 Sep 2024 16:58:15 +0800 Subject: [PATCH] fix typo in config.py reduce_max_clusters_by_max_templates -> reduce_msa_clusters_by_max_templates --- openfold/config.py | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/openfold/config.py b/openfold/config.py index 7bf30e391..c813df8c5 100644 --- a/openfold/config.py +++ b/openfold/config.py @@ -108,13 +108,13 @@ def model_config( # AF2 Suppl. Table 5, Model 1.1.1 c.data.train.max_extra_msa = 5120 c.data.predict.max_extra_msa = 5120 - c.data.common.reduce_max_clusters_by_max_templates = True + c.data.common.reduce_msa_clusters_by_max_templates = True c.data.common.use_templates = True c.data.common.use_template_torsion_angles = True c.model.template.enabled = True elif name == "model_2": # AF2 Suppl. Table 5, Model 1.1.2 - c.data.common.reduce_max_clusters_by_max_templates = True + c.data.common.reduce_msa_clusters_by_max_templates = True c.data.common.use_templates = True c.data.common.use_template_torsion_angles = True c.model.template.enabled = True @@ -134,14 +134,14 @@ def model_config( elif name == "model_1_ptm": c.data.train.max_extra_msa = 5120 c.data.predict.max_extra_msa = 5120 - c.data.common.reduce_max_clusters_by_max_templates = True + c.data.common.reduce_msa_clusters_by_max_templates = True c.data.common.use_templates = True c.data.common.use_template_torsion_angles = True c.model.template.enabled = True c.model.heads.tm.enabled = True c.loss.tm.weight = 0.1 elif name == "model_2_ptm": - c.data.common.reduce_max_clusters_by_max_templates = True + c.data.common.reduce_msa_clusters_by_max_templates = True c.data.common.use_templates = True c.data.common.use_template_torsion_angles = True c.model.template.enabled = True