Skip to content

Unexpected missing Ensembl ID #167

@JoshLoecker

Description

@JoshLoecker

Hello,
I tried converting a list of Ensembl IDs and got an error back about missing values, and upon further investigation, the Ensembl ID ENSG00000168078 is not returning an Entrez Gene ID when I thought it should have

This is my code:

from bioservices.mygeneinfo import MyGeneInfo

my_gene_info = MyGeneInfo(cache=False)
response = my_gene_info.get_queries("ENSG00000168078", species="9606", fields="all")
print(response)

And this is the output of response:

[
  {
    "query": "ENSG00000168078",
    "notfound": true
  }
]

I am using the BioServices MyGeneInfo package, but I get the same result when using the online API page at https://mygene.info/v3/api

When I search for this ID on NCBI, I get an Entrez Gene of 55872 (NCBI Page)

Metadata

Metadata

Assignees

Labels

No labels
No labels

Type

No type

Projects

No projects

Milestone

No milestone

Relationships

None yet

Development

No branches or pull requests

Issue actions