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Description
Hello! I'm truly grateful for this extremely useful code that enables such amazing 3D displays. However, I have a few questions regarding the partner function. I'm attempting to retrieve the post - synaptic sites of neurons in the MANC (Flywire also when needed) database from a set of their presynaptic neurons, but it doesn't seem to be working. Could you please let me know what might be going wrong? I would greatly appreciate any help.
{
"rois": {
"source": "https://storage.googleapis.com/flyem-vnc-roi-d5f392696f7a48e27f49fa1a9db5ee3b/all-vnc-roi/mesh/",
"r3": ["all-vnc.ngmesh"]
},
"neurons": {
"source": "https://manc-dvid.janelia.org/api/node/7b5e8f7f805c4314bee37b75b4ff9292/segmentation_meshes",
"A": [13964],
"B": [12997]
},
"synapses": {
"source": "https://manc-dvid.janelia.org/api/node/v1.0/synapses",
"A_to_B_Post": {
"neurons": [13964],
"partner": [12997],
"type": "post",
"confidence": 0.0,
"radius": 200.0
},
"A_to_B_Pre": {
"neurons": [13964],
"partner": [12997],
"type": "pre",
"confidence": 0.0,
"radius": 200.0
}
},
"lightRotationY": 180,
"animation": [
["setValue", {"meshes": "rois.r3","alpha": 0.20}],
[ "setValue", { "meshes" : "neurons.A", "color" : "#000000" } ],
[ "setValue", { "meshes" : "neurons.B", "color" : "#2c00bf" } ],
[ "setValue", { "meshes" : "synapses.A_to_B_Pre", "color" : "#FF0000" } ],
[ "setValue", { "meshes" : "synapses.A_to_B_Post", "color" : "#00BF2C" } ],
["frameCamera", {"bound": "neurons"}],
["orbitCamera", {"axis": "y", "endingRelativeAngle": 183.5, "duration": 0}],
["orbitCamera", {"axis": "z", "endingRelativeAngle": 9.5, "duration": 0}],
["orbitCamera", {"axis": "y", "duration": 4,"endingRelativeAngle": 0}],
["advanceTime", {"by": 0.6}],
["fade", {"meshes":"rois.r3","startingAlpha":0,"endingAlpha":0,"duration": 0.1}],
["advanceTime", {"by": 0.6}],
["fade", {"meshes":"neurons.A neurons.B synapses.A_to_B_Pre synapses.A_to_B_Post","startingAlpha":0,"endingAlpha":1,"duration": 0.1}],
["advanceTime", {"by": 1}],
["orbitCamera", {"axis": "z", "duration": 2,"endingRelativeAngle": -360}],
["advanceTime", {"by": 3}],
["fade", {"meshes":"neurons.A neurons.B synapses.A_to_B_Pre synapses.A_to_B_Post","startingAlpha":0,"endingAlpha":0,"duration": 0.1}]
]
}