Merge pull request Electrostatics#430 from kiyoon/feat/python-310

build: support python 3.10

Author: sobolevnrm

.github/workflows/python-package.yml

@@ -15,7 +15,7 @@ jobs:
     if: "!contains(github.event.head_commit.message, 'noci')"
     strategy:
       matrix:
-        python-version: ['3.11', '3.12', '3.13']
+        python-version: ['3.10', '3.11', '3.12', '3.13']
 
     steps:
       - uses: actions/checkout@v4

pdb2pqr/structures.py

@@ -7,7 +7,7 @@
 .. codeauthor:: Nathan Baker
 """
 
-from typing import Self
+from typing_extensions import Self
 
 from .config import BACKBONE
 from .pdb import ATOM, HETATM

pdb2pqr/topology.py

@@ -74,8 +74,7 @@ def startElement(self, tag_name, _):
         elif tag_name == "titrationstate":
             if self.curr_titration_state is not None:
                 _LOGGER.info(
-                    "** Overwriting current topology_titration_state "
-                    "object!"
+                    "** Overwriting current topology_titration_state object!"
                 )
             self.curr_titration_state = TopologyTitrationState(
                 self.curr_residue

pyproject.toml

@@ -32,7 +32,7 @@ authors = [
 readme = "README.md"
 license = { file = "LICENSE.md" }
 # NOTE: make sure you change [tool.pyright] pythonVersion to match this
-requires-python = ">=3.11,<4"
+requires-python = ">=3.10,<4"
 classifiers = [
   "Development Status :: 4 - Beta",
   "Environment :: Console",
@@ -44,6 +44,7 @@ classifiers = [
   "Operating System :: POSIX",
   "Programming Language :: Python :: Implementation :: CPython",
   "Programming Language :: Python",
+  "Programming Language :: Python :: 3.10",
   "Programming Language :: Python :: 3.11",
   "Programming Language :: Python :: 3.12",
   "Programming Language :: Python :: 3.13",
@@ -58,6 +59,7 @@ dependencies = [
   "propka >= 3.5",
   "requests",
   "docutils",
+  "typing-extensions",
 ]
 
 [project.optional-dependencies]
@@ -108,7 +110,7 @@ typeCheckingMode = "standard"
 useLibraryCodeForTypes = true
 autoImportCompletions = true
 
-pythonVersion = "3.11"
+pythonVersion = "3.10"
 # pythonPlatform = "Linux"
 
 reportDuplicateImport = true

tests/logging_test.py

@@ -34,6 +34,6 @@ def test_log_output_in_pqr_location(
         (
             "pdb2pqr.io",
             "INFO",
-            f'Logs stored: {tmp_path / output_file.split(".")[0]}.log',
+            f"Logs stored: {tmp_path / output_file.split('.')[0]}.log",
         )
     )