Skip to content

Trouble about input format #5

@zax-bioinforer

Description

@zax-bioinforer

Hi,fgvieira!there is something confusing for me.
I am estimating the divergence time of microarray data,so I choose ngsF-HMM to do.
this is my code :
ngsF-HMM --geno geno.tsv.gz --pos pos.txt --n_ind 53 --n_sites 53827 --out test

and it tells me:
[read_geno] wrong GENO file format. Less fields than expected!

my --geno file format is a matrix ,columns represent samples;rows represents sites, and genotypes are coded as {0,1,2}.

I can't tell what is the reason it went wrong.

Is it possible that you can send me a format.

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions