Discussions

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  How to understand detrend_df_f function, please help me

  qweasdf1354 asked Apr 6, 2024 in Q&A · Unanswered

  

  

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  Suggestion: remove SBX loading code and recommend using sbxreader instead

  ethanbb started Mar 14, 2024 in General · Closed

  

  

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  MemoryError everytime

  zhouyi0812 asked Feb 17, 2024 in Q&A · Unanswered

  

  

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  Adding background components doesn't affect signal-to-noise ratio

  LeoJuh asked Feb 26, 2024 in Q&A · Unanswered

  

  

  

  

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  Which is the essential memory mapped file for the situation of signal extraction?

  masa6161 asked Feb 14, 2024 in Q&A · Unanswered

  

  

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  Equivalent of CaImAn-MATLAB field "Df"?

  mitlabence asked Feb 23, 2024 in Q&A · Unanswered

  

  

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  Next Caiman Community Meeting: Thursday February 22

  EricThomson announced Feb 2, 2024 in Announcements

  

  

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  Memory-mapping is needed (or preferred); even if raw data can load to RAM?

  masa6161 asked Feb 12, 2024 in Q&A · Unanswered

  

  

  

  

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  Extreme large value from estimates.C

  zhouyi0812 asked Feb 12, 2024 in Q&A · Unanswered

  

  

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  MemoryError when running Caiman many times

  zhouyi0812 asked Feb 10, 2024 in Q&A · Answered

  

  

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  Dealing with bleaching

  zhouyi0812 asked Jan 30, 2024 in Q&A · Unanswered

  

  

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  Release 1.10 -- CNMF and CNMFE demos major revisions : feedback welcome.

  EricThomson announced Jan 31, 2024 in Announcements

  

  

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  Caiman background absorbs neurons

  LeoJuh asked Jan 31, 2024 in Q&A · Unanswered

  

  

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  Looking for clarification from the motion correction output

  zhouyi0812 asked Jan 30, 2024 in Q&A · Unanswered

  

  

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  Caiman and SLURM and setup_cluster()

  pgunn started Nov 15, 2023 in General

  

  

  

  

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  Reduce the number of cluster (n_process)

  zhouyi0812 asked Jan 30, 2024 in Q&A · Unanswered

  

  

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  averaging components

  wienecke asked Jan 28, 2024 in Q&A · Unanswered

  

  

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  Maximum Recursion Depth Reached Error

  charan1319 asked Oct 19, 2023 in Q&A · Closed · Unanswered

  

  

  

  

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  how to use register_multisession function to align recordings with large translations

  lsainzvillalba asked Sep 20, 2023 in Q&A · Unanswered

  

  

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  Applying motion correction shifts to additional channel

  pbl007 asked Nov 26, 2023 in Q&A · Unanswered

  

  

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  Negative spatial correlation

  MarziyehPourmousavi asked Jul 21, 2022 in Q&A · Unanswered

  

  

  

  

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  Converted deconvolution data into spike train (binary point)

  zhouyi0812 asked Oct 17, 2023 in Q&A · Unanswered

  

  

  

  

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  Motion correction parameter to maintain the same image size

  kfouke1 asked Dec 13, 2023 in Q&A · Closed · Answered

  

  

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  Stopping Criteria for CNMF-E in Caiman

  bashsyr started Dec 2, 2023 in General

  

  

  

  

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  hiPSC cell activity detected as background noise

  JalterMain asked Nov 18, 2023 in Q&A · Unanswered

  

  

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