Population size

[heatherturtle]

Hi Lindsay,

Can polyRAD be used for a smaller population of 60, or is it best suited for larger pops?

[lvclark]

It is best suited for larger pops, since estimates of allele frequency won't be very accurate in a population of that size (unless it is totally unstructured). An alternative is you can use the "naïve method" described here: https://lvclark.r-universe.dev/articles/polyRADtutorials/population_genetics.html. That would ignore allele frequencies entirely.