Merge pull request #279 from nf-core/outdir_fix

Changed default outdir to null

Author: maxulysse

CHANGELOG.md

@@ -14,6 +14,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 ### Fixes
 
 - Fixed error that caused mismapping of IgG controls to their targets in certain samplesheet configurations.
+- Changed the default output directory to `null` to conform with other nf-core workflows [#279](https://github.com/nf-core/cutandrun/pull/279)
 
 ## [3.2.1] - 2023-10-22
 

nextflow.config

@@ -129,7 +129,7 @@ params {
     blacklist                  = null
 
     // Boilerplate options
-    outdir                       = "./results"
+    outdir                       = null
     publish_dir_mode             = 'copy'
     email                        = null
     email_on_fail                = null

nextflow_schema.json

@@ -27,8 +27,7 @@
                     "type": "string",
                     "format": "directory-path",
                     "description": "The output directory where the results will be saved. You have to use absolute paths to store on Cloud infrastructure.",
-                    "fa_icon": "fas fa-folder-open",
-                    "default": "./results"
+                    "fa_icon": "fas fa-folder-open"
                 },
                 "multiqc_title": {
                     "type": "string",