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    84 repositories

    • sanbomics_scripts

      Public
      scripts and notebooks from sanbomics
      Jupyter Notebook
      •166•0•0•0•Updated Aug 13, 2023Aug 13, 2023

    • scientific-visualization-book

      Public
      An open access book on scientific visualization using python and matplotlib
      Python
      •
      Other
      •1k•0•0•0•Updated Apr 2, 2022Apr 2, 2022

    • datasets_mh

      Public
      Datasets for ML, Analysis, etc
      49•0•0•0•Updated Mar 18, 2022Mar 18, 2022

    • effective_pandas_book

      Public
      Errata and code for Effective Pandas book
      Jupyter Notebook
      •133•0•0•0•Updated Feb 24, 2022Feb 24, 2022

    • learn-python

      Public
      Codecademy | Learn Python 3
      Python
      •
      MIT License
      •400•0•0•0•Updated Jan 23, 2022Jan 23, 2022

    • Tiny-Python-3.9-Notebook

      Public
      This repository contains the text for the Tiny Python 3.9 Notebook.
      34•0•0•0•Updated May 17, 2021May 17, 2021

    • compbio_src

      Public
      Introduction to Computational Biology - source Rmarkdown files
      R
      •
      MIT License
      •43•0•0•0•Updated Apr 22, 2021Apr 22, 2021

    • OutlierConf2021

      Public
      ⭕ Slides and hands-on codes for my talk "ggplot Wizardry: My Favorite Tricks and Secrets for Beautiful Plots in R" at the 1st OutlierConf, February 4–7 2021.
      HTML
      •72•0•0•0•Updated Mar 25, 2021Mar 25, 2021

    • datasets

      Public
      Data and code behind the Data Science Path curriculum at Codecademy
      Jupyter Notebook
      •238•0•0•0•Updated Feb 24, 2021Feb 24, 2021

    • data-science-exercises

      Public
      Folder with data science exercises, updated as I study and practice
      Jupyter Notebook
      •1•0•0•0•Updated Nov 25, 2020Nov 25, 2020

    • InfyTQ-Answers

      Public
      Solution of all InfyTQ Assignments, Exercise, Quiz
      Python
      •25•0•0•0•Updated Nov 22, 2020Nov 22, 2020

    • BIOC281

      Public
      Repository for BIOC 281: Introduction to Single Cell Expression Analysis
      Jupyter Notebook
      •7•0•0•0•Updated Oct 30, 2020Oct 30, 2020

    • CodingInterviews

      Public
      This repository contains coding interviews that I have encountered in company interviews
      Python
      •783•0•0•0•Updated Oct 2, 2020Oct 2, 2020

    • E-MTAB-6141

      Public
      Data from Lewis, Barnes, Blighe et al., Cell Rep. 2019 Aug 27; 28(9): 2455–2470.e5.
      R
      •38•0•0•0•Updated May 28, 2020May 28, 2020

    • biopython-notebook

      Public
      Notebooks to introduce biopython
      Jupyter Notebook
      •
      MIT License
      •100•0•0•0•Updated Apr 4, 2020Apr 4, 2020

    • statcomp_src

      Public
      Statistical Computing - source Rmarkdown files
      MIT License
      •36•0•0•0•Updated Mar 29, 2020Mar 29, 2020

    • bios201

      Public
      Course material for "BIOS 201: Next-generation sequencing and applications"
      HTML
      •16•0•0•0•Updated Mar 20, 2020Mar 20, 2020

    • R-Network-Visualization-Workshop

      Public
      Static and dynamic network visualization with R - code and tutorial from Polnet 2016 workshop.
      network
      HTML
      •150•0•0•0•Updated Jan 1, 2020Jan 1, 2020

    • main-hbc-training

      Public
      Summary of training offered by the Harvard Chan Bioinformatics Core
      CSS
      •
      Other
      •17•0•0•0•Updated Jan 1, 2020Jan 1, 2020

    • python-machine-learning-book-3rd-edition

      Public
      The "Python Machine Learning (3rd edition)" book code repository
      Jupyter Notebook
      •
      MIT License
      •2.1k•0•0•0•Updated Dec 29, 2019Dec 29, 2019

    • swcarpentry

      Public
      A meta-repository to help navigate the many lessons and repos of the Software Carpentry Community
      103•0•0•0•Updated Dec 28, 2019Dec 28, 2019

    • python-novice-gapminder

      Public
      Introduction to Python for non-programmers using gapminder data
      HTML
      •
      Other
      •448•0•0•0•Updated Dec 28, 2019Dec 28, 2019

    • stat479-machine-learning-fs19

      Public
      Course material for STAT 479: Machine Learning (FS 2019) taught by Sebastian Raschka at University Wisconsin-Madison
      Jupyter Notebook
      •256•0•0•0•Updated Dec 17, 2019Dec 17, 2019

    • Interview_Practice

      Public
      Practice for coding interviews.
      Python
      •5•0•0•0•Updated Dec 3, 2019Dec 3, 2019

    • PythonDataScienceHandbook

      Public
      Python Data Science Handbook: full text in Jupyter Notebooks
      python
      Jupyter Notebook
      •
      MIT License
      •19k•0•0•0•Updated Nov 2, 2019Nov 2, 2019

    • In-depth-NGS-Data-Analysis-Course

      Public
      Materials for 12-day course on analyzing RNA-Seq, ChIP-Seq and variant calling data.
      HTML
      •
      Other
      •266•0•0•0•Updated Oct 30, 2019Oct 30, 2019

    • practical_ggplot2

      Public
      Step-by-step examples of building publication-quality figures in ggplot2
      HTML
      •17•0•0•0•Updated Aug 19, 2019Aug 19, 2019

    • Dungeon-Of-The-Silver-Key

      Public
      A basic text-based dungeon crawler written in Python
      Python
      •
      GNU General Public License v3.0
      •6•0•0•0•Updated Jul 31, 2019Jul 31, 2019

    • jax-workshop

      Public
      Jupyter Notebook
      •
      Other
      •4•0•0•0•Updated Jul 18, 2019Jul 18, 2019

    • MariaNattestad-R_for_biologists

      Public
      R
      •3•0•0•0•Updated Jul 5, 2019Jul 5, 2019