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    35 repositories

    • ilincsAPI

      Public
      HTML
      •
      MIT License
      •2•10•1•1•Updated Apr 10, 2025Apr 10, 2025

    • webgimm

      Public
      R
      •
      Other
      •0•1•0•0•Updated Feb 20, 2025Feb 20, 2025

    • CLEAN

      Public
      R
      •1•3•1•0•Updated Oct 15, 2024Oct 15, 2024

    • grcalculator

      Public
      HTML
      •4•5•0•0•Updated Feb 25, 2024Feb 25, 2024

    • pinet-server

      Public
      JavaScript
      •
      MIT License
      •1•1•0•0•Updated Feb 1, 2024Feb 1, 2024

    • GRcalculator-docker

      Public
      Dockerfile
      •1•0•0•0•Updated Jul 4, 2023Jul 4, 2023

    • gimmRW

      Public
      gimmR package for windows
      R
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Apr 5, 2023Apr 5, 2023

    • CLEAN.Mm

      Public
      R
      •0•0•0•0•Updated Oct 18, 2022Oct 18, 2022

    • CLEAN.Hs

      Public
      R
      •0•0•0•0•Updated Sep 15, 2022Sep 15, 2022

    • iPAS

      Public
      iPAS is an R package for detecting changes in signaling pathway activity from transcriptional profiles.
      R
      •0•1•0•0•Updated May 26, 2022May 26, 2022

    • grbrowser

      Public
      R
      •4•1•0•0•Updated Mar 1, 2021Mar 1, 2021

    • grtutorial

      Public
      HTML
      •3•0•0•0•Updated Mar 1, 2021Mar 1, 2021

    • GRmetrics

      Public
      R
      •0•1•1•0•Updated Nov 4, 2020Nov 4, 2020

    • paslincs

      Public
      pasLINCS R package
      HTML
      •
      MIT License
      •0•2•1•0•Updated May 26, 2020May 26, 2020

    • CLEAN.Rn

      Public
      R
      •0•0•0•0•Updated Mar 2, 2020Mar 2, 2020

    • scRNA-seq

      Public
      0•0•0•0•Updated Dec 18, 2019Dec 18, 2019

    • GREP2

      Public
      GEO RNA-seq Experiments Processing Pipeline
      rna-seqpipelinesragene-expression-omnibussratoolkitrna-seq-pipeline
      R
      •10•22•3•0•Updated Oct 25, 2019Oct 25, 2019

    • LINCS_MOA_pred_implementation

      Public
      ML classifiers used to predict Mechanism of Action of chemical perturbagens using L1000 gene expression data
      Jupyter Notebook
      •1•0•0•0•Updated Jul 12, 2019Jul 12, 2019

    • SigNetA

      Public
      R
      •0•0•0•0•Updated May 28, 2019May 28, 2019

    • GREIN

      Public
      GREIN : GEO RNA-seq Experiments Interactive Navigator
      processingrna-seqrgeographical-interfacegene-expressionbioinformatics-pipelineinteractive-analysisshiny-appsrna-seq-analysis
      HTML
      •
      GNU General Public License v2.0
      •19•50•1•0•Updated May 28, 2019May 28, 2019

    • SigNetA_Docker

      Public
      R
      •0•0•0•0•Updated May 3, 2019May 3, 2019

    • KEGGlincs

      Public
      Repository for Bioconductor package KEGGlincs
      R
      •1•0•0•1•Updated Mar 26, 2019Mar 26, 2019

    • PCCSE-provenance

      Public
      processing pipeline to modify PCCSE level 4 data
      Shell
      •
      MIT License
      •0•0•0•0•Updated Jan 24, 2019Jan 24, 2019

    • shinyLi

      Public
      JavaScript
      •2•0•0•0•Updated Oct 24, 2018Oct 24, 2018

    • neurolincs-pp

      Public
      Python
      •1•0•0•0•Updated Sep 11, 2017Sep 11, 2017

    • GRmetrics_old

      Public
      This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/GRmetrics.html Contributions: …
      R
      •0•0•0•0•Updated Jul 29, 2017Jul 29, 2017

    • rcytoscapejs2

      Public
      JavaScript
      •
      Other
      •0•0•0•0•Updated Apr 13, 2017Apr 13, 2017

    • tRegs

      Public
      R
      •0•0•0•0•Updated Apr 7, 2017Apr 7, 2017

    • gimmR

      Public
      R package for genomics data analysis using infinite mixture models
      R
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated Mar 2, 2017Mar 2, 2017

    • treg

      Public
      R
      •0•0•0•0•Updated Mar 1, 2017Mar 1, 2017