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simulation_single error #99

@bio-info-guy

Description

@bio-info-guy

If the split is simulation_single, the DS.split_data should output a 2 object tuple like simulation

GEARS/gears/pertdata.py

Lines 351 to 360 in f374e43

if split in ['simulation', 'simulation_single']:
# simulation split
DS = DataSplitter(self.adata, split_type=split)
adata, subgroup = DS.split_data(train_gene_set_size = train_gene_set_size,
combo_seen2_train_frac = combo_seen2_train_frac,
seed=seed,
test_perts = test_perts,
only_test_set_perts = only_test_set_perts
)

currently only simulation output a 2 object tuple

GEARS/gears/data_utils.py

Lines 193 to 198 in f374e43

if self.split_type == 'simulation':
return self.adata, {'test_subgroup': test_subgroup,
'val_subgroup': val_subgroup
}
else:
return self.adata

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