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imagej_macros_and_scripts
imagej_macros_and_scripts PublicImageJ macros and scripts written at the imaging facility MRI
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napari-bigfish
napari-bigfish PublicA napari-plugin providing an alternative GUI for Big-FISH. Big-FISH is a python package for the analysis of smFISH images
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mri-workshop-machine-learning
mri-workshop-machine-learning PublicThe MRI machine learning workshop
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microglia-analyzer
microglia-analyzer PublicA Napari plugin meant to detect and segment microglia before extracting some measures about them.
Python 3
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MontpellierRessourcesImagerie/napari-microscopy-metrics’s past year of commit activity - qupath-tree-measurements Public
Segment cells on QuPath, classify them to different channels and measure the intensity in others. Then, make a tree of measurements.
MontpellierRessourcesImagerie/qupath-tree-measurements’s past year of commit activity - napari-membrane-intensity Public
Allows to segment cells, track them over time, and measure the intensity in their membrane. For yeasts specifically, also allows to merge each bud with its mother.
MontpellierRessourcesImagerie/napari-membrane-intensity’s past year of commit activity - entry-exit-mouse-box Public
MontpellierRessourcesImagerie/entry-exit-mouse-box’s past year of commit activity
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