Module service : bug fixes

.env.example

@@ -0,0 +1,18 @@
+# BisQue Docker Compose Environment Configuration
+
+# Server Configuration
+BISQUE_SERVER=http://localhost:8080
+BISQUE_PORT=8080
+
+# Admin Configuration
+BISQUE_ADMIN_EMAIL=admin@yourdomain.com
+BISQUE_ADMIN_ID=admin
+BISQUE_ORGANIZATION=Your Organization
+BISQUE_TITLE=BisQue Image Repository
+
+# Container Settings
+CONTAINER_NAME=bisque-server
+IMAGE_TAG=bisque-ucsb:latest
+
+# Network Settings
+NETWORK_NAME=bisque-network

.gitattributes

@@ -0,0 +1,86 @@
+# Auto detect text files and perform LF normalization
+* text=auto
+
+# Explicitly declare text files that should always be normalized and converted to native line endings on checkout.
+*.py text
+*.js text
+*.html text
+*.css text
+*.md text
+*.txt text
+*.yml text
+*.yaml text
+*.json text
+*.xml text
+
+# Declared shell scripts as text files with LF line endings
+*.sh text eol=lf
+
+# Declared specific shell scripts that should maintain executable permissions
+run-bisque.sh text eol=lf
+bq-admin-setup.sh text eol=lf
+virtualenv.sh text eol=lf
+start-bisque.sh text eol=lf
+entry.sh text eol=lf
+
+# Dockerfile and related files should use LF
+Dockerfile text eol=lf
+Dockerfile.* text eol=lf
+*.dockerfile text eol=lf
+Makefile text eol=lf
+
+# Configuration files
+*.conf text eol=lf
+*.config text eol=lf
+*.ini text eol=lf
+
+# Declared files that will always have CRLF line endings on checkout.
+# (These are typically Windows-specific files)
+*.bat text eol=crlf
+*.cmd text eol=crlf
+
+# Denoted all files that are truly binary and should not be modified.
+*.png binary
+*.jpg binary
+*.jpeg binary
+*.gif binary
+*.ico binary
+*.pdf binary
+*.zip binary
+*.tar.gz binary
+*.tgz binary
+*.gz binary
+*.bz2 binary
+*.xz binary
+*.7z binary
+*.rar binary
+*.exe binary
+*.dll binary
+*.so binary
+*.dylib binary
+
+# Python compiled files
+*.pyc binary
+*.pyo binary
+*.pyd binary
+
+# Archives
+*.tar binary
+*.jar binary
+*.war binary
+*.ear binary
+
+# Fonts
+*.ttf binary
+*.eot binary
+*.otf binary
+*.woff binary
+*.woff2 binary
+
+# Video and audio
+*.mp4 binary
+*.avi binary
+*.mov binary
+*.mp3 binary
+*.wav binary
+*.ogg binary

.gitignore

@@ -1,3 +1,180 @@
+# Byte-compiled / optimized / DLL files
+__pycache__/
+*.py[cod]
+*$py.class
+
+# C extensions
+*.so
+
+# Distribution / packaging
+.Python
+build/
+develop-eggs/
+dist/
+downloads/
+eggs/
+.eggs/
+lib/
+!source/**/lib/
+lib64/
+parts/
+sdist/
+var/
+wheels/
+share/python-wheels/
+*.egg-info/
+.installed.cfg
+*.egg
+MANIFEST
+
+# PyInstaller
+#  Usually these files are written by a python script from a template
+#  before PyInstaller builds the exe, so as to inject date/other infos into it.
+*.manifest
+*.spec
+
+# Installer logs
+pip-log.txt
+pip-delete-this-directory.txt
+
+# Unit test / coverage reports
+htmlcov/
+.tox/
+.nox/
+.coverage
+.coverage.*
+.cache
+nosetests.xml
+coverage.xml
+*.cover
+*.py,cover
+.hypothesis/
+.pytest_cache/
+cover/
+
+# Translations
+*.mo
+*.pot
+
+# Django stuff:
+*.log
+local_settings.py
+db.sqlite3
+db.sqlite3-journal
+
+# Flask stuff:
+instance/
+.webassets-cache
+
+# Scrapy stuff:
+.scrapy
+
+# Sphinx documentation
+docs/_build/
+
+# PyBuilder
+.pybuilder/
+target/
+
+# Jupyter Notebook
+.ipynb_checkpoints
+
+# IPython
+profile_default/
+ipython_config.py
+
+# pyenv
+#   For a library or package, you might want to ignore these files since the code is
+#   intended to run in multiple environments; otherwise, check them in:
+# .python-version
+
+# pipenv
+#   According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
+#   However, in case of collaboration, if having platform-specific dependencies or dependencies
+#   having no cross-platform support, pipenv may install dependencies that don't work, or not
+#   install all needed dependencies.
+#Pipfile.lock
+
+# UV
+#   Similar to Pipfile.lock, it is generally recommended to include uv.lock in version control.
+#   This is especially recommended for binary packages to ensure reproducibility, and is more
+#   commonly ignored for libraries.
+#uv.lock
+
+# poetry
+#   Similar to Pipfile.lock, it is generally recommended to include poetry.lock in version control.
+#   This is especially recommended for binary packages to ensure reproducibility, and is more
+#   commonly ignored for libraries.
+#   https://python-poetry.org/docs/basic-usage/#commit-your-poetrylock-file-to-version-control
+#poetry.lock
+
+# pdm
+#   Similar to Pipfile.lock, it is generally recommended to include pdm.lock in version control.
+#pdm.lock
+#   pdm stores project-wide configurations in .pdm.toml, but it is recommended to not include it
+#   in version control.
+#   https://pdm.fming.dev/latest/usage/project/#working-with-version-control
+.pdm.toml
+.pdm-python
+.pdm-build/
+
+# PEP 582; used by e.g. github.com/David-OConnor/pyflow and github.com/pdm-project/pdm
+__pypackages__/
+
+# Celery stuff
+celerybeat-schedule
+celerybeat.pid
+
+# SageMath parsed files
+*.sage.py
+
+# Environments
+.env
+.venv
+env/
+venv/
+ENV/
+env.bak/
+venv.bak/
+
+# Spyder project settings
+.spyderproject
+.spyproject
+
+# Rope project settings
+.ropeproject
+
+# mkdocs documentation
+/site
+
+# mypy
+.mypy_cache/
+.dmypy.json
+dmypy.json
+
+# Pyre type checker
+.pyre/
+
+# pytype static type analyzer
+.pytype/
+
+# Cython debug symbols
+cython_debug/
+
+# PyCharm
+#  JetBrains specific template is maintained in a separate JetBrains.gitignore that can
+#  be found at https://github.com/github/gitignore/blob/main/Global/JetBrains.gitignore
+#  and can be added to the global gitignore or merged into this file.  For a more nuclear
+#  option (not recommended) you can uncomment the following to ignore the entire idea folder.
+#.idea/
+
+# Ruff stuff:
+.ruff_cache/
+
+# PyPI configuration file
+.pypirc
+
+#Old gitignore
 # Compiled source #
 ###################
 *.com
@@ -40,3 +217,24 @@ Thumbs.db
 # Model Files
 .npy
 .pt
+
+# Dir created during development
+/source/config/
+/source/data/
+/source/bqcore/bq/core/public/core
+
+# files created during development
+*.pid
+*.log.save
+/source/bqserver/bq/data_service/controllers/parsetab.py
+/source/public/*
+/source/external/*
+
+builder/start-scripts.d/
+
+source/Results/
+source/SampleData/
+source/images/
+
+source/*-firebase-adminsdk*.json
+site.cfg copy.default