Release v0.5.1

What's Changed

• fix: Removed deprecated cargo_bin() function in snapbox by @ranger-ross in #104
• I105 dist stats by @johnlees in #106

New Contributors

• @ranger-ross made their first contribution in #104

Full Changelog: v0.5.0...v0.5.1

Release v0.5.0

What's Changed

• Change default k to 31 by @johnlees in #101

Full Changelog: v0.4.1...v0.5.0

Release v0.4.1

What's Changed

• Fix distance with multiple samples and ambigous bases by @johnlees in #98

Full Changelog: v0.4.0...v0.4.1

Release v0.4.0 (ska lo)

This release adds the ska lo command for detection of nearby SNPs and indels.

What's Changed

• Added link & reference to the sandbox.bio tutorial. by @vrbouza in #88
• Covbuildmerge by @jhellewell14 in #89
• Skalo by @jhellewell14 in #86
• updated skalo with indel output by @rderelle in #91

New Contributors

• @vrbouza made their first contribution in #88
• @jhellewell14 made their first contribution in #89
• @rderelle made their first contribution in #91

Full Changelog: v0.3.11...v0.4.0

Release v0.3.11

What's Changed

• Better default filtering options for ska distance by @johnlees in #82

Full Changelog: v0.3.10...v0.3.11

Release v0.3.10

What's Changed

• ska delete upgrade by @johnlees in #80

Full Changelog: v0.3.9...v0.3.10

Release v0.3.9

What's Changed

• Fix for ska cov with low counts by @johnlees in #76

Full Changelog: v0.3.8...v0.3.9

Release v0.3.8

What's Changed

• Adding max frequence reads parameter by @apollis44 in #74
• Simplified proportion reads computation by @apollis44 in #75

New Contributors

• @apollis44 made their first contribution in #74

Full Changelog: v0.3.7...v0.3.8

Release v0.3.7

What's Changed

• Consistent method for dealing with ref bias in ska map by @johnlees in #70

Full Changelog: v0.3.6...v0.3.7

Release v0.3.6

What's Changed

• Fix double file prefix; update VCF parsing by @johnlees in #66

Full Changelog: v0.3.5...v0.3.6