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Cutoff for duplications

Status: Open.

#53 In brentp/duphold;

· robertzeibich opened on Sep 1, 2023

Should the tool duphold also work on small deletions <50bp?

Status: Open.

#52 In brentp/duphold;

· robertzeibich opened on Aug 17, 2023

svtype = variant.info.get("SVTYPE", "SV")

Status: Open.

#51 In brentp/duphold;

· okendojo opened on May 25, 2023

IndexDefect error in Version 0.2.1 - call for update in bioconda

Status: Open.

#50 In brentp/duphold;

· sunjh22 opened on Nov 2, 2022

Not every line was annotated?

Status: Open.

#49 In brentp/duphold;

· xiucz opened on Sep 13, 2022

using duphold on a multisample trio VCF file

Status: Open.

#48 In brentp/duphold;

· prasundutta87 opened on Sep 5, 2022

The "REF prefixes differ" followed by Failed to merge alleles

Status: Open.

#47 In brentp/duphold;

· jjfarrell opened on Mar 31, 2022

missing insertion

Status: Open.

#46 In brentp/duphold;

· Danisov opened on Feb 18, 2022

Duphold with Nanopore data?

Status: Open.

#45 In brentp/duphold;

· AnneBoshove opened on Jan 14, 2022

setting DUPHOLD_SAMPLE_NAME doesn't work

Status: Open.

#44 In brentp/duphold;

· am8265 opened on Sep 21, 2021

Feature Request: Duphold Stats for Insertions

Status: Open.

#42 In brentp/duphold;

· jjfarrell opened on Mar 17, 2021

duphold use with gVCF files

Status: Open.

#41 In brentp/duphold;

· am8265 opened on Feb 6, 2021