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Stabilize a Python API to decouple core logic from the CLI

Status: Open.

#336 In chemosim-lab/ProLIF;

· uzman2406 opened on Feb 7, 2026

Regarding interaction diagrams

Status: Open.

#335 In chemosim-lab/ProLIF;

· Kamecs opened on Feb 3, 2026

Create nem Class interaction (Amide-π Stacking)

Status: Open.

#330 In chemosim-lab/ProLIF;

· pablo-arantes opened on Jan 20, 2026

Frameiteratorall not handled

Status: Open.

#322 In chemosim-lab/ProLIF;

· Erikna00 opened on Jan 13, 2026

PiStacking fails on intra-protein detection

Status: Open.

#305 In chemosim-lab/ProLIF;

· pbuslaev opened on Sep 11, 2025

3D visualization issue (occasionally happen) after using protein helper function

Status: Open.

#304 In chemosim-lab/ProLIF;

· yuyuan871111 opened on Sep 1, 2025

Docs improvement on WaterBridge

Status: Open.

#299 In chemosim-lab/ProLIF;

· cbouysset opened on Aug 14, 2025

suggestion: more restrictive cation/anion definitions

Status: Open.

#288 In chemosim-lab/ProLIF;

· wenyan4work opened on Jul 9, 2025

Informations about the nested dictionary ifp

Status: Open.

#260 In chemosim-lab/ProLIF;

· xavgit opened on Apr 7, 2025

Memory Issue and Segmentation Fault When Increasing Cutoff in ProLIF Selection with big systems

Status: Open.

#243 In chemosim-lab/ProLIF;

· mohamedmarzouk22 opened on Feb 12, 2025

Different visualization area in a view of pymol3d in the tutorial

Status: Open.

#228 In chemosim-lab/ProLIF;

· xavgit opened on Nov 22, 2024

Addition of <code>Waterbridge</code> interactions

Status: Open.

#219 In chemosim-lab/ProLIF;

· talagayev opened on Sep 30, 2024