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Fix cran#99

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e-kotov merged 6 commits intomainfrom
fix-cran
Jan 13, 2026
Merged

Fix cran#99
e-kotov merged 6 commits intomainfrom
fix-cran

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@e-kotov e-kotov commented Jan 13, 2026

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google-labs-jules bot and others added 4 commits January 11, 2026 23:25
- Use `mcr.microsoft.com/devcontainers/r:latest` as base image.
- Exclude `rJava` from dependency installation to keep container Java-free.
- Install Posit Air CLI and VS Code extension.
- Install Quarto extension.
- Use `mcr.microsoft.com/devcontainers/r:latest` as base image.
- Exclude `rJava` from dependency installation to keep container Java-free.
- Install Posit Air CLI and VS Code extension.
- Install Quarto extension.
- Update scripts to address PR review feedback (robust dependency handling, verification).
- Use `mcr.microsoft.com/devcontainers/r:latest` as base image.
- Exclude `rJava` from dependency installation to keep container Java-free.
- Install Posit Air CLI and VS Code extension.
- Install Quarto extension.
- Update scripts to address PR review feedback (pinned version, security, robustness).
Copilot AI review requested due to automatic review settings January 13, 2026 14:13
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Pull request overview

This pull request addresses CRAN submission requirements by fixing documentation formatting, improving test reliability, adding development container support, and enhancing validation error messages.

Changes:

  • Changed documentation formatting from bold (\strong) to italic (\emph) for package name "rJava" throughout documentation files
  • Improved test reliability by updating mock filename to be parseable and adding Windows skip condition
  • Added devcontainer configuration for development environment setup
  • Added duplicate validation logic in java_install function (already present in java_unpack)

Reviewed changes

Copilot reviewed 13 out of 13 changed files in this pull request and generated 1 comment.

Show a summary per file
File Description
tools/meta-data-update-and-submission.R Added commented-out devtools check commands for CRAN submission workflow
tests/testthat/test-java_install-mocked.R Fixed test by using parseable filename and adding Windows skip condition
man/use_java.Rd Changed rJava package name from bold to italic formatting
man/rjava_path_locking_note.Rd Changed rJava package name from bold to italic formatting
man/java_env_set.Rd Changed rJava package name from bold to italic formatting
man/java_ensure.Rd Changed rJava package name from bold to italic formatting
R/java_install.R Added validation error checks for version, arch, and platform detection
R/internal_utilities.R Added @nord tag to internal function documentation
R/global_params.R Changed rJava package name from bold to italic formatting in source
.devcontainer/setup.sh Added bash script for devcontainer setup with Posit Air CLI installation
.devcontainer/setup.R Added R script to install dependencies excluding rJava
.devcontainer/devcontainer.json Added VS Code devcontainer configuration
.Rbuildignore Added devcontainer-related directories to build ignore list

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Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>
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codecov bot commented Jan 13, 2026

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 88.79%. Comparing base (b4a223a) to head (0c0f5d6).
⚠️ Report is 1 commits behind head on main.

Additional details and impacted files
@@           Coverage Diff           @@
##             main      #99   +/-   ##
=======================================
  Coverage   88.79%   88.79%           
=======================================
  Files          27       27           
  Lines        2819     2819           
=======================================
  Hits         2503     2503           
  Misses        316      316           

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@e-kotov e-kotov merged commit c809ef7 into main Jan 13, 2026
11 checks passed
@e-kotov e-kotov deleted the fix-cran branch January 13, 2026 15:04
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