Remove VariantContexts from most fgbio tools#836

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kstromhaug wants to merge 7 commits intoks_remove_variantcontextsetbuilderfrom

ks_rm_variant_contexts

Commits on Apr 12, 2022

Fix VariantMask
Kari Stromhaug
committed
Fix UpdateVcfContigNames
Kari Stromhaug
committed
Fix JointVariantContextIterator, minus the comparator
Kari Stromhaug
committed

Commits on Apr 29, 2022

Fixed AssessPhasing and tests
Kari Stromhaug
committed
Added a comparator to the iterator
Kari Stromhaug
committed
remove contexts from ErrorRateByReadPosition
Kari Stromhaug
committed
Hack MakeTwoSampleMixtureVcf to compile for debugging other tools
Kari Stromhaug
committed