Updating workflows/transcriptomics/rnaseq-sr from 1.2 to 1.3 #1082
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gxydevbot wants to merge 1 commit intogalaxyproject:mainfrom
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Updating workflows/transcriptomics/rnaseq-sr from 1.2 to 1.3 #1082gxydevbot wants to merge 1 commit intogalaxyproject:mainfrom
gxydevbot wants to merge 1 commit intogalaxyproject:mainfrom
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Hello! This is an automated update of the following workflow: workflows/transcriptomics/rnaseq-sr. I created this PR because I think one or more of the component tools are out of date, i.e. there is a newer version available on the ToolShed.
By comparing with the latest versions available on the ToolShed, it seems the following tools are outdated:
toolshed.g2.bx.psu.edu/repos/iuc/fastp/fastp/0.24.0+galaxy3should be updated totoolshed.g2.bx.psu.edu/repos/iuc/fastp/fastp/1.0.1+galaxy3toolshed.g2.bx.psu.edu/repos/iuc/rgrnastar/rna_star/2.7.11a+galaxy1should be updated totoolshed.g2.bx.psu.edu/repos/iuc/rgrnastar/rna_star/2.7.11b+galaxy0toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_awk_tool/9.3+galaxy1should be updated totoolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_awk_tool/9.5+galaxy3toolshed.g2.bx.psu.edu/repos/devteam/bamtools_filter/bamFilter/2.5.2+galaxy2should be updated totoolshed.g2.bx.psu.edu/repos/devteam/bamtools_filter/bamFilter/2.5.2+galaxy3toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_find_and_replace/9.3+galaxy1should be updated totoolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_find_and_replace/9.5+galaxy3toolshed.g2.bx.psu.edu/repos/iuc/featurecounts/featurecounts/2.0.8+galaxy0should be updated totoolshed.g2.bx.psu.edu/repos/iuc/featurecounts/featurecounts/2.1.1+galaxy0toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_text_file_with_recurring_lines/9.3+galaxy1should be updated totoolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_text_file_with_recurring_lines/9.5+galaxy3toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_sed_tool/9.3+galaxy1should be updated totoolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_sed_tool/9.5+galaxy3toolshed.g2.bx.psu.edu/repos/iuc/multiqc/multiqc/1.27+galaxy0should be updated totoolshed.g2.bx.psu.edu/repos/iuc/multiqc/multiqc/1.33+galaxy0toolshed.g2.bx.psu.edu/repos/iuc/samtools_view/samtools_view/1.20+galaxy3should be updated totoolshed.g2.bx.psu.edu/repos/iuc/samtools_view/samtools_view/1.22+galaxy1toolshed.g2.bx.psu.edu/repos/devteam/samtools_idxstats/samtools_idxstats/2.0.5should be updated totoolshed.g2.bx.psu.edu/repos/devteam/samtools_idxstats/samtools_idxstats/2.0.8The workflow release number has been updated from 1.2 to 1.3.
If you want to skip this change, close this PR without deleting the branch. It will be reopened if another change is detected.
Any commit from another author than 'planemo-autoupdate' will prevent more auto-updates.
To ignore manual changes and allow autoupdates, delete the branch.