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Pull requests: galaxyproject/tools-iuc

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Pull requests list

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#7660 opened Feb 6, 2026 by bernt-matthias Loading…
3 of 5 tasks
Correction for 2025-07-14 prebuilt_db slugs in kraken2_build_database…
#7644 opened Feb 2, 2026 by jennaj Loading…
3 of 5 tasks
14
New Tool addition: Paffy
#7643 opened Feb 2, 2026 by Maed0x Loading…
3 of 5 tasks
13
Add HyPhy CLN tool wrapper
#7626 opened Jan 27, 2026 by spond Loading…
3 of 5 tasks
3
Wrap Liana toolkit for Single-cell and Spatial Transcriptomics
#7625 opened Jan 26, 2026 by khaled196 Loading…
2 of 5 tasks
48
Update vg tool
#7623 opened Jan 26, 2026 by SaimMomin12 • Draft
3 of 5 tasks
2
Updating tools/jbrowse2 from version 3.7.0 to 4.1.3
#7619 opened Jan 26, 2026 by gxydevbot Loading…
1
Metamdbg
#7611 opened Jan 22, 2026 by tcollins2011 Loading…
3 of 5 tasks
9
Update diamond to 2.1.17 cofest
#7608 opened Jan 22, 2026 by bernt-matthias • Draft
3 of 5 tasks
3
ENA upload tool - move credentials to requirements
#7606 opened Jan 21, 2026 by RZ9082 Loading…
2 of 5 tasks
@RZ9082
6
ENA Webin - Move credentials to requirements
#7605 opened Jan 21, 2026 by RZ9082 • Draft
2 of 5 tasks
@RZ9082
12
added orthologer tool
#7604 opened Jan 20, 2026 by ftegenfe Loading…
3 of 5 tasks
60
Update tools/snp dists to 1.2.0 tool update/enhancement
#7603 opened Jan 20, 2026 by SaimMomin12 • Draft
3 of 5 tasks
Updating tools/pretext from version 0.1.9 to 0.2.3
#7598 opened Jan 19, 2026 by gxydevbot Loading…
1
Pyega3 - Move credentials to requirements
#7594 opened Jan 16, 2026 by RZ9082 Loading…
2 of 5 tasks
@RZ9082
8
Update Scanpy to v1.11.5 and add support for interactive vitessce plots
#7588 opened Jan 14, 2026 by pavanvidem Loading…
3 of 5 tasks
14
Add mags visualization tool
#7583 opened Jan 13, 2026 by alexandrah1704 Loading…
3 of 5 tasks
7
Update Jbrowse2 to 4.0.3
#7582 opened Jan 13, 2026 by abretaud Loading…
3 of 5 tasks
2
New tool: wfmash
#7580 opened Jan 12, 2026 by mirelaminkova Loading…
3 of 5 tasks
21
mist typing - MLST & cgMLST
#7579 opened Jan 12, 2026 by BertBog Loading…
3 of 5 tasks
27
New tool: TSENAT
#7574 opened Jan 6, 2026 by usuario-prohibido Loading…
2 tasks
9
Updating tools/snp-dists from version 0.8.2 to 1.2.0
#7572 opened Jan 5, 2026 by gxydevbot Loading…
Updating tools/recentrifuge from version 1.16.1 to 2.0.0
#7571 opened Jan 5, 2026 by gxydevbot Loading…
Updating tools/episcanpy from version 0.3.2 to 0.4.0
#7558 opened Dec 22, 2025 by gxydevbot Loading…
1
Updating tools/diamond from version 2.1.16 to 2.1.21 cofest
#7557 opened Dec 22, 2025 by gxydevbot Loading…
@bernt-matthias
3
ProTip! Exclude everything labeled bug with -label:bug.