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Darren J. Lin edited this page Apr 25, 2023
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Please check the procedures of read alignment, assembly and calling at SV detection.
Please check the HG002 evaluation steps in benchmarking.
| Dataset | Description | Source |
|---|---|---|
| HiFi-10kb | 10kb average read length | GIAB FTP |
| HiFi-15kb | 15kb average read length | GIAB FTP |
| HiFi-18kb | 18kb average read length | SRA Acession IDs: SRR18239004, SRR18239005, SRR18239006 and SRR18239007 |
| ONT-9kb | 9kb average read length | GIAB FTP |
| ONT-19kb | 19kb average read length | SRA Acession ID: SRR18363746 |
| ONT-30kb | 30kb average read length | SRA Acession ID: SRR18363752 and SRR18363753 |