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  1. DerrickWood/kraken2 DerrickWood/kraken2 Public

    The second version of the Kraken taxonomic sequence classification system

    C++ 866 296

  2. torognes/vsearch torognes/vsearch Public

    Versatile open-source tool for microbiome analysis

    C++ 735 132

  3. OSC/ondemand OSC/ondemand Public

    Supercomputing. Seamlessly. Open, Interactive HPC Via the Web

    JavaScript 425 167

  4. NDSU-Geddes-Lab/plasmid-id NDSU-Geddes-Lab/plasmid-id Public

    For identifying plasmid IDs and deconvoluting PCR1 barcodes in plasmid ID sequencing protocol

    Python

  5. StephenSzwiec/qsarify StephenSzwiec/qsarify Public

    Library of tools for the analysis of QSAR/QSPR datasets

    Python 2

  6. nanoporetech/modkit nanoporetech/modkit Public

    A bioinformatics tool for working with modified bases

    Rust 245 23