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Warning Newer version of the nf-core template is available. Your pipeline is using an old version of the nf-core template: 3.5.1. For more documentation on how to update your pipeline, please see the nf-core documentation and Synchronisation documentation. |
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As part of the strict syntax, update modules and subworkflows that now use topic channels:
bcftools/index,bcftools/norm,gawk,gunzip,minimac4/compressref,samtools/mergeglimpse2/phase,stitch,bam_impute_stitch,bam_vcf_impute_glimpse2.Channelforchannel