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Hi! Thanks to your suggestions @pinin4fjords I was finally able to do the flattening! I made a new PR specifically for this here, I can merge it directly but I would be happy to have a quick review or feedback, maybe from you @mashehu if you have some time? |
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@quentinblampey is this one ready for a re-review by @mashehu and @pinin4fjords ? |
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Hi @FriederikeHanssen, yes it's ready for a re-review! |
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please move this and the following test samplesheet to https://github.com/nf-core/test-datasets/tree/sopa
Co-authored-by: Matthias Hörtenhuber <mashehu@users.noreply.github.com>
Co-authored-by: Matthias Hörtenhuber <mashehu@users.noreply.github.com>
Co-authored-by: Matthias Hörtenhuber <mashehu@users.noreply.github.com>
Co-authored-by: Matthias Hörtenhuber <mashehu@users.noreply.github.com>
Co-authored-by: Matthias Hörtenhuber <mashehu@users.noreply.github.com>
Co-authored-by: Matthias Hörtenhuber <mashehu@users.noreply.github.com>
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Warning Newer version of the nf-core template is available. Your pipeline is using an old version of the nf-core template: 3.5.1. For more documentation on how to update your pipeline, please see the nf-core documentation and Synchronisation documentation. |
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Do not merge! This is a PR of dev compared to the TEMPLATE branch for whole-pipeline reviewing purposes. Changes should be made to dev and this PR should not be merged! The actual release PR is at