Skip to content

fix samplesheet_full.csv#1696

Open
williambrandler wants to merge 1 commit intonf-core:rnaseqfrom
williambrandler:rnaseq
Open

fix samplesheet_full.csv#1696
williambrandler wants to merge 1 commit intonf-core:rnaseqfrom
williambrandler:rnaseq

Conversation

@williambrandler
Copy link

@williambrandler williambrandler commented Jul 31, 2025

Fix samplesheet_full.csv to

  1. use public http links
  1. to have sample column via awk one liner
  • awk -F',' 'BEGIN {OFS=","} NR==1 {print "sample",$0} NR>1 {print $1"_"$2,$0}' samplesheet_tmp.csv > samplesheet_full.csv

Signed-off-by: William Brandler <WBrandler@NB15L.local>
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

1 participant