This repository contains R implementations of the algorithms proposed in "MOKPE: Drug–target interaction prediction via manifold optimization based kernel preserving embedding".

• demo_mokpe_projection_train.R => how to use the training procedure of the algorithm for drug-target interaction prediction of unseen drugs.
• mokpe_projection_train.R => training procedure for projection
• demo_mokpe_projection_test.R => how to use the test procedure of the algorithm for drug-target interaction prediction of unseen drugs.
• mokpe_projection_test.R => test procedure for projection

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• demo_mokpe_embedding.R => how to use the embedding algorithm
• mokpe_embedding_train.R => training procedure for embedding

contact: ocbinatli AT gmail DOT com