Repositories list

• mia

  Public
  Modular, object-based analysis for ImageJ/Fiji

  modularimagejimage-processing+ 2image-analysisfiji-plugin

  Java

  •

  GNU General Public License v3.0

  •2•16•44•0•Updated Feb 18, 2026Feb 18, 2026

• mia-python

  Public
  In development interface between MIA and Python

  Jupyter Notebook

  •0•0•0•0•Updated Feb 17, 2026Feb 17, 2026

• mianalysis.github.io

  Public
  Webpage for MIA

  documentationnextjsimage-analysis

  Astro

  •

  GNU General Public License v3.0

  •0•1•0•9•Updated Jan 29, 2026Jan 29, 2026

• mia-onnx

  Public
  Modules to run ONNX deep learning models in MIA

  HTML

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Jan 21, 2026Jan 21, 2026

• mia-server

  Public
  Java server running ModularImageAnalysis (MIA). Primarily developed for MIA for Schools project.

  Java

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Oct 14, 2025Oct 14, 2025

• schools

  Public
  HTML

  •0•0•0•0•Updated Oct 6, 2025Oct 6, 2025

• mia-for-schools

  Public
  Schools outreach project teaching about images and image analysis

  TypeScript

  •0•0•3•0•Updated Sep 20, 2025Sep 20, 2025

• mia-videoloader

  Public
  Video loading for Fiji using JavaCV. Adds video loading functionality to MIA.

  Java

  •

  GNU General Public License v3.0

  •0•0•1•0•Updated Sep 12, 2025Sep 12, 2025

• mia-matlab

  Public
  Plugin for MIA adding MATLAB-specific functions.

  Java

  •

  GNU General Public License v3.0

  •0•0•1•0•Updated Jun 26, 2025Jun 26, 2025

• mia-examples

  Public
  Example workflows for MIA

  Java

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Feb 9, 2024Feb 9, 2024

• mia-deeplearning

  Public
  (Deprecated) Plugin for MIA adding functionality dependent on CSBDeep

  Java

  •

  GNU General Public License v3.0

  •0•1•0•0•Updated Nov 9, 2022Nov 9, 2022