Oslo Centre for Biostatistics and Epidemiology

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69 repositories

imoc_pdac
Public
Python
•0•0•0•0•Updated Feb 16, 2026Feb 16, 2026
trajpy
Public
Trajpy - empowering feature engineering for trajectory analysis across domains.
time-series trajectory-analysis diffusion python-package repeated-measurements cell-migration
Python
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GNU General Public License v3.0
•2•9•6•0•Updated Feb 9, 2026Feb 9, 2026
BayesMallows
Public
R-package for Bayesian preference learning with the Mallows rank model.
r-package mallows-model
R
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GNU General Public License v3.0
•10•22•0•0•Updated Feb 6, 2026Feb 6, 2026
trajpy-ui
Public
User interface for the trajpy package.
Python
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GNU General Public License v3.0
•0•0•5•0•Updated Feb 1, 2026Feb 1, 2026
kids-chd
Public
Congenital Heart Disease among Children
R
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GNU General Public License v3.0
•0•0•3•0•Updated Jan 30, 2026Jan 30, 2026
GPTCM
Public
Generalized promotion time cure model
variable-selection survival-analysis bayesian-inference omics-data-integration tumor-heterogeneity tumor-microenvironment cell-populations multiscale-data
C++
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GNU General Public License v3.0
•0•0•0•0•Updated Jan 29, 2026Jan 29, 2026
DIscBIO
Public
A user-friendly R pipeline for biomarker discovery in single-cell transcriptomics
jupyter-notebook scrna-seq r-package transcriptomics biomarker-discovery single-cell-analysis
Jupyter Notebook
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Other
•5•13•3•0•Updated Jan 9, 2026Jan 9, 2026
pCRscore
Public
Python package to calculate pCR scores
Python
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GNU General Public License v3.0
•0•1•1•0•Updated Dec 18, 2025Dec 18, 2025
workshop-stat-highdim
Public
Workshop website for Statistical Principles in Machine Learning for Small Biomedical Data
R
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MIT License
•3•2•0•0•Updated Dec 12, 2025Dec 12, 2025
brmss
Public
Bayesian Regression Models using Spike-and-Slab Priors
C++
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GNU General Public License v3.0
•0•0•0•0•Updated Dec 4, 2025Dec 4, 2025
imml
Public
A Python package for integrating, processing, and analyzing incomplete multi-modal datasets.
python machine-learning missing-data incomplete-data multi-modal-learning
Python
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BSD 3-Clause "New" or "Revised" License
•2•23•0•0•Updated Nov 19, 2025Nov 19, 2025
BayesSUR
Public
R package for high-dimensional multivariate Bayesian variable and covariance selection in linear regression
linear-regression r-package multivariate-analysis
C++
•2•0•0•0•Updated Nov 12, 2025Nov 12, 2025
BAPS
Public
Bayesian Analysis of Population Structure
MATLAB
•3•3•5•0•Updated Nov 11, 2025Nov 11, 2025
contingencytables
Public
Statistical Analysis of Contingency Tables
r-package contingency-table
R
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GNU General Public License v3.0
•2•4•0•0•Updated Nov 11, 2025Nov 11, 2025
deaths-potentially-averted
Public
Stata code for the article "Deaths potentially averted by small changes in physical activity and sedentary time: an individual participant data meta-analysis of…
Stata
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GNU General Public License v3.0
•1•2•0•0•Updated Nov 10, 2025Nov 10, 2025
ctu-template
Public template
R
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MIT License
•0•0•0•0•Updated Nov 10, 2025Nov 10, 2025
ocbe-uio.r-universe.dev
Public
Link GitHub R packages to R-universe
0•0•0•0•Updated Oct 29, 2025Oct 29, 2025
MADMMplasso
Public
Multi variate multi response 'ADMM' with interaction effects
R
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GNU General Public License v3.0
•0•1•2•0•Updated Oct 27, 2025Oct 27, 2025
public-slides
Public
A repository for slides presented to the public or publicly-available slides
git slides presentations
HTML
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Creative Commons Attribution Share Alike 4.0 International
•0•1•0•0•Updated Oct 17, 2025Oct 17, 2025
.github
Public
0•0•0•0•Updated Oct 15, 2025Oct 15, 2025
rangejoin
Public
Divides a dataset into control and treatment groups and matches
R
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GNU General Public License v3.0
•0•0•1•0•Updated Oct 13, 2025Oct 13, 2025
psbcSpeedUp
Public
Penalized Semiparametric Bayesian Cox Models
survival-analysis omics-data bayesian-cox-models bayesian-lasso
C++
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GNU General Public License v3.0
•1•3•0•0•Updated Sep 30, 2025Sep 30, 2025
NSF-Oslo
Public
Oslo section of the Norwegian Statistical Association
SCSS
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MIT License
•1•0•0•0•Updated Sep 19, 2025Sep 19, 2025
bayesynergy
Public
An R package for Bayesian semi-parametric modelling of in-vitro drug combination experiments
bayesian stan r-package drug-combination semiparametric-models
C++
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GNU General Public License v2.0
•3•5•2•1•Updated Sep 19, 2025Sep 19, 2025
Delphi
Public
Modelling human health trajectories using generative transformers
Jupyter Notebook
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MIT License
•107•0•1•0•Updated Sep 18, 2025Sep 18, 2025
BayesSurvive
Public
Bayesian survival models for high-dimensional data
survival-analysis omics-data-integration graph-learning bayesian-variable-selection high-dimensional-statistics bayesian-cox-models
R
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GNU General Public License v3.0
•0•4•5•0•Updated Sep 18, 2025Sep 18, 2025
ocbe-uio.github.io
Public archive
Future consumer-friendly version of OCBE's GitHub page
github-page
CSS
•0•0•0•0•Updated Sep 8, 2025Sep 8, 2025
bd4predict
Public
BD4QoLPredict is an API and Dashboard developed in the context of the BD4QoL European project for improving quality of life of head and neck cancer survivors.
machine-learning prediction-model
Python
•0•0•0•0•Updated Sep 6, 2025Sep 6, 2025
mmcbench
Public
Python
•0•0•0•0•Updated May 28, 2025May 28, 2025
TruncExpFam
Public
R package to generate data related to the Truncated Exponential Family
r-package truncated-distribution
R
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GNU General Public License v3.0
•1•0•2•0•Updated Apr 14, 2025Apr 14, 2025