Repositories list

• oralMAGs

  Public
  Python

  •0•0•0•0•Updated Jan 20, 2026Jan 20, 2026

• AMP_defensins

  Public
  Contains all necessary files and codes required for the analyses done in the AMPcombi defensin paper.

  Jupyter Notebook

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Dec 3, 2025Dec 3, 2025

• AMPcombi

  Public
  AMPcombi parses and filters results from AMP prediction tools

  ampgenesantimicrobial-peptides+ 1antimicrobial-genes-annotation

  Python

  •

  Other

  •1•7•4•0•Updated Nov 27, 2025Nov 27, 2025

• pptase_ddiscoideum

  Public
  Jupyter Notebook

  •0•1•0•0•Updated Oct 20, 2025Oct 20, 2025

• EMN001_Paleofuran

  Public
  Repository for data, code & figures related to the publication: "Natural products from reconstructed bacterial genomes of the Middle and Upper Paleolithic"

  genome-assemblyadnanatural-products+ 10biosynthetic-gene-clustersancient-dnapaleolithicdental-calculusmetagenome-binninggenome-reconstructionchlorobium+ 3

  Python

  •1•6•0•0•Updated Apr 22, 2024Apr 22, 2024

• tiny_projects

  Public
  HTML

  •0•0•0•0•Updated Feb 3, 2023Feb 3, 2023

• analysis-project-structure

  Public template
  Template and documentation on how to structure bioinformatic componenets of projects

  6•10•2•0•Updated Sep 13, 2022Sep 13, 2022