Repositories list

• rustybam

  Public
  bioinformatics toolkit in rust

  bioinformaticsgenomics

  Rust

  •

  MIT License

  •4•93•4•0•Updated Feb 15, 2026Feb 15, 2026

• SafFire

  Public
  JavaScript

  •8•31•2•0•Updated Feb 14, 2026Feb 14, 2026

• asm-to-reference-alignment

  Public
  R

  •6•7•0•0•Updated Feb 10, 2026Feb 10, 2026

• hap-windows

  Public
  Extract haplotype-specific sequences centered on BED intervals from phased VCFs

  Python

  •0•1•0•0•Updated Feb 6, 2026Feb 6, 2026

• asm-smk

  Public
  Python

  •

  MIT License

  •0•2•0•0•Updated Feb 4, 2026Feb 4, 2026

• .github

  Public
  Vollger Lab GitHub organization profile

  0•1•0•0•Updated Feb 3, 2026Feb 3, 2026

• R-template

  Public template
  R

  •0•0•0•0•Updated Jan 23, 2026Jan 23, 2026

• SmkTemplate

  Public template
  A template repository for snakemake workflows.

  Python

  •

  MIT License

  •2•42•0•0•Updated Dec 5, 2025Dec 5, 2025

• fire-window

  Public
  R

  •0•3•0•0•Updated Nov 13, 2025Nov 13, 2025

• DSA-phasing

  Public
  Python

  •

  MIT License

  •0•0•0•0•Updated Oct 29, 2025Oct 29, 2025

• NucFreq

  Public
  Python

  •

  MIT License

  •9•38•2•1•Updated Oct 6, 2025Oct 6, 2025

• k-mer-variant-phasing

  Public
  Python

  •

  MIT License

  •1•10•0•0•Updated Sep 15, 2025Sep 15, 2025

• mrvplot

  Public
  HTML

  •0•3•0•0•Updated Aug 14, 2025Aug 14, 2025

• fastCN-smk

  Public
  Python

  •

  MIT License

  •4•4•0•0•Updated Jun 5, 2025Jun 5, 2025

• Rhodonite

  Public
  A workflow for modularly running various repeat masking programs

  Perl

  •

  MIT License

  •1•3•0•0•Updated Jun 4, 2025Jun 4, 2025

• StainedGlass

  Public
  Make colorful identity heatmaps of genomic sequence

  HTML

  •

  MIT License

  •15•128•8•0•Updated May 24, 2024May 24, 2024