MalariaSmearSearch

MalariaSmearSearch is a database of blood smears used in malaria diagnosis.

Setup

1. Get files

    git clone https://github.com/pierrepo/MalariaSmearSearch.git
    cd MalariaSmearSearch
   

2. Install virtualenv

    sudo pip3 install virtualenv
   

3. Create virtual environment

    virtualenv -p /usr/bin/python3 venv
   

4. Activate virtualenv

    source venv/bin/activate
   

5. Install requirements

    pip install -r requirements.txt
   

6. Initialize database

    python setup-db.py
   

7. Quit virtualenv

    deactivate
   

Usage

1. Update project repository

    git pull
   

2. Activate virtualenv

    source venv/bin/activate
   

3. Update requirements

    pip install -r requirements.txt
   

4. Run Python webserver

    python __init__.py
   

5. Open web browser at http://127.0.0.1:5000/

6. Kill web app

    ctrl-c
   

7. Quit virtualenv

    deactivate