NEXUS partition format (IQ-TREE compatible)

The optional partition file generated during supermatrix construction is now compatible with the IQ-TREE NEXUS partition format:

seqtui examples/LOC* -s -t -p partitions.nex -o supermatrix.fasta
# Creates NEXUS partition file compatible with IQtree:
#   #nexus
#   begin sets;
#       charset LOC_01790 = 1-286;
#       charset LOC_11070 = 287-636;
#       charset LOC_39310 = 637-951;
#   end;

Initial public release

Initial public release

This is the first public release of SeqTUI, a terminal-based sequence viewer and toolkit.

Main features

• Interactive terminal viewer for nucleotide and protein sequences
• Support for aligned and unaligned sequences
• On-the-fly translation and FASTA export
• Export isolated biallelic SNPs to VCF
• Vim-style Navigation: h/j/k/l, w/b/e, Ctrl+U/D, search with / and ?
• Command-Line Mode: Batch convert, translate, combine — pipe-friendly output
• Designed for large datasets and HPC environments

Precompiled binaries are provided for Linux, macOS (Intel and Apple Silicon), and Windows.

For Linux

• seqtui-v0.1.0-linux-x86_64.tar.gz requires glibc ≥ 2.32.
• seqtui-v0.1.0-linux-x86_64-musl.tar.gz has no glibc requirement (statically linked with musl).

Notes

• Installing via cargo install is probably the best option (see readme).
• Please do not hesitate to report any issues.