Quantifying 2D cell shape and epithelial tissue dynamics
Simulations of epithelial dynamics in 1D.
A guided project to put your knowledge of image analysis into practice. You will be assessed on your ability to build a database, create a python mini-package to resolve three goals and document them.
This project explores how curvature and geometric constraints shape 3D epithelial shells during development. Using computational models validated on hundreds of cysts, we uncover topological rules that govern epithelial organization.
Source code for "Coupling dynamics of 2D Notch-Delta signalling", by Francisco Berkemeier and Karen M. Page
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